Both of these Inns are in the South Historic District of Palatka
Bartram Inn - http://www.bartraminn.com
Grand Gables Inn - https://grandgablesinn.com/
These are in the order of nearest to farthest from the River Front.
Hampton Inn - http://www.hilton.com/search/hp/us/fl/palatka/
Quality Inn & Suites - http://www.qualityinn.com/hotel-palatka-florida-FL783?sid=xabAyi.RRqjIgLCV.21
Best Western Inn - http://bestwesternflorida.com/hotels/best-western-inn-of-Palatka
Sleep Inn & Suites - http://www.sleepinn.com/hotel-palatka-florida-FL906
Holiday Inn Express - http://www.ihg.com/holidayinnexpress/hotels/us/en/palatka/pflrs/hoteldetail
Crystal Cove Resort - http://cc-resort.com/
Fish Camps are traditional in this area and if you'd like some local flavor, check these out. They are a little further out than the motels listed above. They are also listed in nearest to farthest.
Georgia Boys Fish Camp - http://www.georgiaboysfishcamp.com/
Stegbones Fish Camp - http://www.stegbones.com
Andersen's Lodge - http://www.andersenslodge.com/
Welaka Lodge - http://www.welakalodge.com/
Lunker Lodge - http://www.lunkerlodgefishcamp.com/
Renegades on the River - http://www.renegadesontheriver.com/
Georgetown Marina - http://www.georgetownmarina.com/
Rodman Campground - Web Page
Renegades on the River - http://www.renegadesontheriver.com/